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Lab Publications

40) Andrey Smelter, Morgan Astra, Hunter N.B. Moseley. "A Fast and Efficient Python Library for Interfacing with the Biological Magnetic Resonance Data Bank" BMC Bioinformatics 18, 175 (2017).

39) Stacy Webb, Tamas Nagy, Hunter N.B. Moseley, Michael Fried, Rebecca E. Dutch. "Hendra virus fusion protein transmembrane domain contributes to pre-fusion protein stability" Journal of Biological Chemistry 292, 5685 (2017).

38) Sen Yao, Robert M. Flight, Eric C. Rouchka, Hunter N.B. Moseley. "Perspectives and Expectations in Structural Bioinformatics of Metalloproteins" Proteins: Structure, Function, and Bioinformatics 85, 938 (2017).

37) Sen Yao, Robert M. Flight, Eric C. Rouchka, Hunter N.B. Moseley. "Aberrant coordination geometries discovered in the most abundant metalloproteins" Proteins: Structure, Function, and Bioinformatics 85, 885 (2017).

37b) Sen Yao, Robert M. Flight, Eric C. Rouchka, Hunter N.B. Moseley. "Cover Image of Volume 85, Issue 5" Proteins: Structure, Function, and Bioinformatics 85(5), cover (2017).

Yao_et_al-2017-Proteins-_Structure,_Function,_and_Bioinformatics_Cover.png
36) Narasimharao Nalabothula, Taha Al-jumaily, Robert M. Flight, Abdallah M. Eteleeb, Shao Xiaorong, Eric C. Rouchka, Hunter N.B. Moseley, and Yvonne Fondufe-Mittendorf. “Genome-wide profiling of PARP1 reveals an interplay with gene regulatory regions and DNA methylation” PLoS ONE 10, e0135410 (2015).

35) Sen Yao, Robert M. Flight, Eric C. Rouchka, and Hunter N.B. Moseley. “A less biased analysis of metalloproteins reveals novel zinc coordination geometries” Proteins: Structure, Function, and Bioinformatics 83, 1470 (2015).

34) Sen Yao, Robert M. Flight, Eric C. Rouchka, and Hunter N.B. Moseley. “A less biased analysis of metalloproteins reveals novel zinc coordination geometries” BCB '15 Proceedings of the 6th ACM Conference on Bioinformatics, Computational Biology and Health Informatics pp493-494 (2015).

33) Andrew N. Lane, Sengodagounder Arumugam, Pawel K. Lorkiewicz, Richard M. Higashi, Sébastien Laulhé, Michael H. Nantz, Hunter N.B. Moseley, and Teresa W.-M. Fan. “Chemoselective detection and discrimination of carbonyl-containing compounds in metabolite mixtures by 1H-detected 15N NMR” Magnetic Resonance in Chemistry, 53, 337 (2015).

32) Abdallah M. Eteleeb, Hunter N.B. Moseley, and Eric C. Rouchka. “A Comparison of Combined P-value Methods for Gene Differential Expression Using RNA-Seq Data” BCB'14: Proceedings of the 5th ACM Conference on Bioinformatics, Computational Biology and Health Informatics, pp417-425 (2014).

31) Joshua M. Mitchell, Teresa, W-M. Fan, Andrew N. Lane, Hunter N.B. Moseley. "Development and In silico Evaluation of Large-Scale Metabolite Identification Methods using Functional Group Detection for Metabolomics" Frontiers in Genetics - Systems Biology 5, 237 (2014).

30) Richard M. Higashi, Teresa W-M. Fan, Pawel K. Lorkiewicz, Hunter N.B. Moseley, Andrew N. Lane. “Stable Isotope Labeled Tracers for Metabolic Pathway Elucidation by GC-MS and FT-MS” Mass Spectrometry Methods in Metabolomics, vol 1198, 147, editor D. Raftery, Humana Press. (2014).

29) William J. Carreer, Robert M. Flight, and Hunter N.B. Moseley. “A computational framework for high-throughput isotopic natural abundance correction of omics-level ultra-high resolution FT-MS datasets” Metabolites, 3, 853-866 (2013).

28) Hunter N.B. Moseley. “Error Analysis and Propagation in Metabolomics Data Analysis” Comp Struct Biotech J, 4, e201301006 (2013).

27) Eric C. Rouchka, Robert M. Flight, and Hunter N.B. Moseley. “Proceedings of the Eleventh Annual UT-ORNL-KBRIN Bioinformatics Summit 2012” BMC Bioinformatics, 13, A1 (2012).

26) Teresa W-M. Fan, Pawel Lorkiewicz, Katherine Sellers, Hunter N.B. Moseley, Richard M. Higashi, and Andrew N. Lane. “Stable isotope-resolved metabolomics and applications to drug development” Pharmacology & Therapeutics, 133, 366 (2012).

25) Hunter N.B. Moseley, Andrew N. Lane, Alex C. Belshoff, Richard M. Higashi, and Teresa W-M. Fan. “A novel method for deconvoluting metabolic subunits from mass isotopologues in stable isotope resolved metabolomic experiments under non steady-state conditions: application to the biosynthesis of UDP-GlcNAc” BMC Biology, 9, 37 (2011).

24) Hunter N.B. Moseley, Richard M. Higashi, Teresa W-M. Fan, and Andrew N. Lane. “Metabolic Modeling of Converging Metabolic Pathways: Analysis of Non-Steady State Stable Isotope-Resolve Metabolism of UDP-GlcNAc and UDP-GalNAc” BIOINFORMATICS 2011 – Proceedings of the International Conference on Bioinformatics Models, Methods and Algorithms. Ed. Marco Pellegrini, Ana Fred, Joaquim Filipe, and Hugo Gamboa. SciTePress, Portugal, 108-115 (2011).

23) Hunter N.B. Moseley, Lindsay J. Sperling, and Chad M. Rienstra. “Automated Protein Resonance Assignments of Magic Angle Spinning Solid-State NMR Spectra of β1 Immunoglobulin Binding Domain of Protein G (GB1)” J Biomol NMR 48, 123-128 (2010).

22) Hunter N.B. Moseley. “Correcting for the Effects of Natural Abundance in Stable Isotope Resolved Metabolomics Experiments Involving Ultra-High Resolution Mass Spectrometry.” BMC Bioinformatics 11, 139-144 (2010).

21) Andrew N. Lane, Teresa W-M. Fan, Zhengzhi Xie, Hunter N.B. Moseley, and Richard M. Higashi. “Isotopomer analysis of lipid biosynthesis by high resolution mass spectrometry and NMR.” Anal. Chim. Acta. 651, 201-208 (2009).

20) Gregory J. Kornhaber, David Snyder, Hunter N.B. Moseley, and Gaetano T. Montelione. “Identification of Zinc-Ligated Cysteine Residues Based on 13Ca and 13Cb Chemical Shift Data.” J Biomol NMR 34, 259-269 (2006).

19) Michael Baran, Hunter N.B. Moseley, James M. Aramini, Marvin J. Bayro, Daniel Monleon, Jessica Lau, and Gaetano T. Montelione. “SPINS: A Laboratory Information Management System for Organizing and Archiving Intermediate and Final Results from NMR Protein Structure Determinations.” Proteins: Struct Funct Bioinformatics, 62,843-851 (2006).

18) Yuanpeng J. Huang, Hunter N.B. Moseley, Michael C. Baran, Cheryl Arrowsmith, Robert Powers, Roberto Tejero, Thomas Szyperski, and Gaetano T. Montelione. “An integrated platform for automated analysis of protein NMR structures.” Meth Enzymology 394, 111-141 (2005).

17) Michael C. Baran, Janet Y. Huang, Hunter N.B. Moseley, and Gaetano T. Montelione. “Automated Analysis of Protein NMR Assignments and Structures.” Chemical Reviews 104, 3541-3556 (2004).

16) Hunter N.B. Moseley, Nadeem Riaz, James M. Aramini, Thomas Szyperski, and Gaetano T. Montelione. “A Generalized Approach to Automated NMR Peak List Editing: Application to Reduced Dimensionality Triple Resonance Spectra.” J Magn Reson 170, 263-277 (2004).

15) Hunter N.B. Moseley, Gurmukh Sahota, and Gaetano T. Montelione, “Assignment Validation Software Suite for the Evaluation and Presentation of Protein Resonance Assignment Data.” J Biomol NMR 28, 341-355 (2004).

14) Deyou Zheng, Yuanpeng J. Huang, Hunter N.B. Moseley, Rong Xiao, James Aramini, G.V.T. Swapna, and Gaetano T. Montelione, “Automated protein fold determination using a minimal NMR constraint strategy.” Protein Science 12, 1232-1246 (2003).

13) Michael Baran, Hunter N.B. Moseley, Gurmukh Sahota, and Gaetano T. Montelione, “SPINS: Standardized ProteIn NMR Storage. A data dictionary and object-oriented relational database for archiving protein NMR spectra.” J Biomol NMR 24, 113-121 (2002).

12) Daniel Monleon, Kimberly Colson, Hunter N.B. Moseley, Clemens Anklin, Robert Oswald, Thomas A. Szyperski, and Gaetano T. Montelione, "Rapid Analysis of Protein Backbone Resonance Assignments Using Cryogenic Probes, Distributed Linux-based Computing, and Automated Spectral Analysis." J Struct Func Genomics 2, 93-101 (2002).

11) Thomas Szyperski, Deok C. Yeh, Dinesh K. Sukumaran, Hunter N.B. Moseley, and Gaetano T. Montelione. “Reduced-dimensionality NMR Spectroscopy for High-Throughput Protein Resonance Assignment: Implementation and Automated Analysis.” Proc Natl Acad Sci USA 99, 8009-8014 (2002).

10) Hunter N.B. Moseley, Daniel Monleon, and Gaetano T. Montelione, "Automatic Determination of Protein Backbone Resonance Assignments from Triple Resonance NMR Data." Meth Enzymology 339, 91 (2001).

9) Hunter N.B. Moseley and Gaetano T. Montelione. “Automated analysis of NMR assignments and structures for proteins.” Curr Opin Struct Biol 9, 635-642 (1999).

8) N. Rama Krishna and Hunter N.B. Moseley. “Complete Relaxation and Conformational Exchange Matrix Analysis of NOESY Spectra of Reversibly Forming Ligand Receptor Complexes: Application to Transferred NOESY,” in “Structure Computation and Dynamics in Protein NMR.” Biological Mag Resonan Vol 17, editors: N. R. Krishna and L.J. Berliner, Plenum Press, New York (1999).

7) Hunter N.B. Moseley. “Implementation and Application of Complete Relaxation and Conformational Exchange Matrix Analysis of NOESY Spectra.” dissertation (1998).

6) Hunter N.B. Moseley, Weontae Lee, Cheryl H. Arrowsmith, and N. Rama Krishna. "Quantitative Determination of Conformational, Dynamic, and Kinetic Parameters of a Ligand Protein/DNA Complex from a CORCEMA Analysis of Intermolecular Transferred NOESY." Biochemistry 36, 5293 (1997).

5) Ernest V. Curto, Hunter N.B. Moseley, and N. Rama Krishna. “CORCEMA evaluation of the potential role of intermolecular transferred NOESY in the characterization of ligand receptor complexes.” J Comp Aided Molec Design 10, 361 (1996).

4) Hunter N.B. Moseley, Ernest V. Curto, and N. Rama Krishna. “Complete Relaxation and Conformational Exchange Matrix (CORCEMA) Analysis of NOESY Spectra of Interacting Systems: Two dimensional Transferred NOESY.” J Magn Reson B108, 243 (1995).

3) Patricia L. Jackson, Hunter N.B. Moseley, and N. Rama Krishna. “Relative Effects of Protein Mediated and Ligand Mediated Spin Diffusion Pathways on Transferred NOESY, and Implications on the Accuracy of the Bound Ligand Conformation.” J Magn Reson B107, 289 (1995).

2) Curtis C. Maier, Hunter N.B. Moseley, Shan Ren Zhou, John N. Whitaker, and J. Edwin Blalock. “Identification of Interactive Determinants on Idiotypic Anti idiotypic Antibodies through Comparison of Their Hydropathic Profiles.” Immunomethods 5, 107 (1994).

1) Rick L. Davies and Hunter N.B. Moseley. “Student Roots: Square root algorithm in Forth.” Forth Dimensions 8(4), 8-9 (1987).
Topic revision: r34 - 12 Apr 2017, HunterMoseley
 

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