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Jonathan Sudkamp Projects

BCAL Projects

1. LipidSearch Assignment Data Normalization Algorithm:
   • Write necessary feature selection functions:
     • gen_anova_feat function
     • gen_sd_log_feat_by_batch function
     • gen_feat_frac_estimates
     • gen_sample_norm_values
   • Basic Augmented Batches Normalization Testing
     • 90% 0-Feature Filter Matrix
     • Log Intensity Non-Differentiable ANOVA Feature Selection
     • Log Intensity Low SD Feature Selection
       • • SD 10% Quantile
         • SD 20% Quantile
     • Intersecting Features Selection and Normalization
     • Random Forests Classification and Prediction with Redo-80 of Reprep-70
   • Heirarchical Clustered Batches Normalization Testing
     • Samples' Augmented Correlations Reordering
     • gen_batch_hclust function